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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907847.1_cds_XP_016457945.1_51617
CDS Infomation

[gene=LOC107781719] [db_xref=GeneID:107781719] [protein=shaggy-related protein kinase NtK-1-like] [protein_id=XP_016457945.1] [location=join(44038..44151,44269..44361,44455..44514,44595..44867,45176..45250,49328..49384,49489..49629,49720..49770,51565..51660,51755..51838,53925..54027,54108..54190)] [gbkey=CDS]
Sequence

ATGACTTCAGTAGGCTTAGCACCTGTATCCGATTTGAGAGAATCCAGTAGCCATAGTGTT
GGTGTAGATAGGCTGCCTGAGGAGATGAATGACATGAGAATCAGGGATGATAAGGAAATC
GAAGCAGCTATTGTGGATGGTAATGGGACTGAGACAGGCCATATAATAGTGACAACTACT
GGTGGTAGACATGGTCAGCCAAAACAGACTATCAGTTATATGGCTGAACGTATTGTTGGA
CAGGGATCATTTGGAGTAGTTTTCCAGGCAAAATGCTTAGAGACTGGTGAAACTGTTGCT
ATCAAAAAGGTTCTTCAAGACAAGAGATATAAGAACCGGGAGCTGCAGACCATGCGCCTT
CTTGATCATCCAAATGTTGTGTGCCTGAAGCACTGCTTCTCTTCCACAACTGAGAAGGAT
GAAGTATATCTTAATTTGGTTCTTGAATACGTCCCTGAAACTGTCCATCGCGTTATTAAA
CACTACAATAAGTTGAATCAAAGGATGCCATTGATACTAGTGAAGCTTTATACATATCAG
ATTTTCAGGGCGTTGTCTTACATCCATCACACAATTGGAGTGTGCCACAGGGACATAAAG
CCTCAGAATCTTTTGGTGAATCCACATACTCACCAGGTTAAATTGTGTGACTTTGGAAGT
GCTAAAGTTCTGGTTAAAGGAGAACCAAATATTTCTTACATCTGCTCTAGGTATTATAGA
GCGCCTGAACTTATATTTGGAGCAACAGAGTACACTACCGCTATTGACATCTGGTCTGCT
GGCTGTGTTCTAGCTGAGCTACTTCTTGGGCAGCCTTTGTTTCCGGGTGAAAGTGGAGTT
GATCAGCTTGTTGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGC
ATGAATCCAAATTATAACGAGTTCAAATTCCCCCAAATTAAAGCTCATCCGTGGCACAAG
ATATTTCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTTTCAAGACTACTGCAGTAC
TCACCTAACTTGCGTTGCACTGCTTTAGAGGCAGTGACCCATGCCTTCTTCGATGAGCTT
CGTGATCCTAATACACGCCTCCCAAATGGCCGTGTCCTTCCCCCCTTGTTTAACTTTAAG
GCCCATGAGTTAAAGGGTGTGTCTGCAGAGTCTCTATTGAAGTTGGTTCCGGAGCATGCC
AGAAAACAGTGCCCGTCCCTTGGTTTATGA

Peptide Sequence

PEP ID

XP_016457945.1
PEP Infomation

PREDICTED: shaggy-related protein kinase NtK-1-like [Nicotiana tabacum]
Sequence

MTSVGLAPVSDLRESSSHSVGVDRLPEEMNDMRIRDDKEIEAAIVDGNGTETGHIIVTTT
GGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRL
LDHPNVVCLKHCFSSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQ
IFRALSYIHHTIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR
APELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC
MNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDEL
RDPNTRLPNGRVLPPLFNFKAHELKGVSAESLLKLVPEHARKQCPSLGL

Transcript Sequence

Gene sequence data has not been registered.